The detailed information of tRNA gene sequence


Sequence ID>A243000323
Genome IDCP031150
Search identical group
Phylum/ClassMethanobacteriota
SpeciesHaloplanus rubicundus CBA1113 [CP031150]
Start position on genome 393113
End posion on genome 393218
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
acgggaacga
tRNA gene sequence 
GGGCCCTTAGCTTAGTCTGGTTAAAGCCCCCGGCTCATAACCGGGTGATCGCTGGTTCGA
ATCCGGCAGGGCCCAtga
Downstream region at tRNA end position 
gaaccgccga
Secondary structure (Cloverleaf model)
>A243000323	Ile2	CAT
                   a      Atga gaaccgccga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     C G G C C     A
    C T G A        A      | | + | |     G
  T         T T C G       G C T G G     C
  G         | | | |                 T T
  G         A A G C
    T T A          C     TGATC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A *
                    C A T
intron: position=38, length=31 (in A-loop)
GTGGGCGCGATACGCGTCGCGGGCATGGGAC
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK