The detailed information of tRNA gene sequence


Sequence ID>A243000483
Genome IDCP045482
Search identical group
Phylum/ClassThermoproteota
SpeciesAcidianus ambivalens LEI 10 [CP045482]
Start position on genome 1090625
End posion on genome 1090717
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
attatatctc
tRNA gene sequence 
GCTCCGGTAGTATAGCCCGGTCAAGTATGCAGGCCTTTCGAGCCTGTGACCCGGGTTCAA
ATCCCGGCCGGAGCACtt
Downstream region at tRNA end position 
atttttccat
Secondary structure (Cloverleaf model)
>A243000483	Glu	TTC
                   c      ACtt atttttccat
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  C         T A T G       C C G G G     C
  G         + | | +                 T T
  G         G T A T
    T C A A        G     TGAC
                    C - G
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T T C
intron: position=21, length=17 (in D-loop)
AGCCTAAGCGCGCCGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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