The detailed information of tRNA gene sequence


Sequence ID>A243000517
Genome IDCP045483
Search identical group
Phylum/ClassThermoproteota
SpeciesStygiolobus azoricus FC6 [CP045483]
Start position on genome 305551
End posion on genome 305454
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
aagaatatat
tRNA gene sequence 
GCCGCCGTAGCTCAGACTGGTAGAGCGCCGGCCTCGTAAGCCGGTGGTCCGGGGTTCAAG
TCCCCGCGGCGGCTttt
Downstream region at tRNA end position 
tggtgattaa
Secondary structure (Cloverleaf model)
>A243000517	Thr	CGT
                   t      Tttt tggtgattaa
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     G C C C C     A
      A G A        A      | | | | |     A
    C       C T C G       C G G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     TGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    C G T
intron: position=38, length=24 (in A-loop)
AGGTATAGTATGAGGATCCGGTAC
Intron
Comment/Decision
Genome/Seq. Info.-

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