The detailed information of tRNA gene sequence


Sequence ID>A243000556
Genome IDCP054587
Search identical group
Phylum/ClassMethanobacteriota
SpeciesHalolamina sp. CBA1230 [CP054587]
Start position on genome 1273758
End posion on genome 1273653
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gttcggatgc
tRNA gene sequence 
GCTCGGTTGGTGTAGTCCGGCCAATCATTTCGGCCTTTCGAGCCGATGACCGGGGTTCAA
ATCCCCGACCGAGCAttc
Downstream region at tRNA end position 
tacgaggaac
Secondary structure (Cloverleaf model)
>A243000556	Glu	TTC
                   c      Attc tacgaggaac
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     G C C C C     A
    C T G A        G      | | | | |     A
  C         T G T G       C G G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        T     TGAC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G *
                    T T C
intron: position=38, length=31 (in A-loop)
GCTGCGAAAGGAACGGCCTACGCAGGAAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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