The detailed information of tRNA gene sequence


Sequence ID>A243000639
Genome IDCP119787
Search identical group
Phylum/ClassMethanobacteriota
SpeciesHaloarcula halobia XH51 [CP119787]
Start position on genome 1853977
End posion on genome 1853866
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ccacgactgc
tRNA gene sequence 
GCTCGGTTGGTGTAGTCCGGCCAATCATCTTGGCCTTTCGAGCCGAGGACAGGGGTTCAA
ATCCCCTACCGAGCACat
Downstream region at tRNA end position 
tctcacggag
Secondary structure (Cloverleaf model)
>A243000639	Glu	TTC
                   c      ACat tctcacggag
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     T C C C C     A
    C T G A        G      | | | | |     A
  C         T G T G       A G G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        C     GGAC
                    T - A
                    T + G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G *
                    T T C
intron: position=38, length=36 (in A-loop)
GCTCGCCCGGAGGTTCGACCCCTCCGCGAGGAAGAC
Intron
Comment/Decision
Genome/Seq. Info.-

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