The detailed information of tRNA gene sequence


Sequence ID>A243000718
Genome IDCP133599
Search identical group
Phylum/ClassThermoplasmatota
SpeciesAcidiplasma sp. [CP133599]
Start position on genome 1591092
End posion on genome 1591003
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaaaaagaT
tRNA gene sequence 
GCCGGGATGGCTCAGTTGGCAGAGCGTCGGACTCATAATCCGAAGGCCTCGGGTTCAATC
CCCGATCCCGGCATac
Downstream region at tRNA end position 
cagcaatatt
Secondary structure (Cloverleaf model)
>A243000718	Met	CAT
                   T      ATac cagcaatatt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          C T
                    T     A G C C C     A
      T G A        G      | | | | |     A
    T       C T C G       T C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A *
                    C A T
intron: position=38, length=15 (in A-loop)
AGCATATGCTGAGAT
Intron
Comment/Decision
Genome/Seq. Info.-

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