The detailed information of tRNA gene sequence


Sequence ID>A243000768
Genome IDCP135238
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfuracidifex metallicus DSM 6482 = JCM 9184 [CP135238]
Start position on genome 607247
End posion on genome 607340
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ttttaggata
tRNA gene sequence 
GCGGGAGTGCCCGAGCGGTTAAGGGGGCGGACTCAAGATCCGCTGGCGAAGGCCATCCGG
GGTCCGAATCCCCGCTCCCGCAtct
Downstream region at tRNA end position 
tagattttag
Secondary structure (Cloverleaf model)
>A243000768	Leu	CAA
                   a      Atct tagattttag
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     G C C C C     A
      C G A        G      | | | | |     G
    G       G C C C       C G G G G     C
    G         | | |                 T C
    T       A G G G
      T A          G     TGGCGAAGGCCATC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G *
                    C A A
intron: position=38, length=12 (in A-loop)
ACCCATTGAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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