The detailed information of tRNA gene sequence


Sequence ID>A243000809
Genome IDCP142027
Search identical group
Phylum/ClassMethanobacteriota
SpeciesHaloarcula sp. GH36 [CP142027]
Start position on genome 1775122
End posion on genome 1775226
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
cacatacaga
tRNA gene sequence 
GGGCCCTTAGCTTAGTCTGGTTAAAGCGATCGGCTCATAACCGATTGAGCGCTGGTTCAA
ATCCGGCAGGGCCCAtcc
Downstream region at tRNA end position 
agctccttgt
Secondary structure (Cloverleaf model)
>A243000809	Ile2	CAT
                   a      Atcc agctccttgt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     C G G C C     A
    C T G A        A      | | + | |     A
  T         T T C G       G C T G G     C
  G         | | | |                 T T
  G         A A G C
    T T A          G     TGAGC
                    A - T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A *
                    C A T
intron: position=38, length=30 (in A-loop)
TCGTCGACGGGGACTCCGTCGGCGTGGGAT
Intron
Comment/Decision
Genome/Seq. Info.-

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