The detailed information of tRNA gene sequence


Sequence ID>A243000811
Genome IDCP142027
Search identical group
Phylum/ClassMethanobacteriota
SpeciesHaloarcula sp. GH36 [CP142027]
Start position on genome 2803086
End posion on genome 2802981
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
agtaggatgc
tRNA gene sequence 
GCTCGGTTGGTGTAGTCCGGCCAATCATCTTGGCCTTTCGAGCCGAGGACAGGGGTTCAA
ATCCCCTACCGAGCACat
Downstream region at tRNA end position 
tctcacgagg
Secondary structure (Cloverleaf model)
>A243000811	Glu	TTC
                   c      ACat tctcacgagg
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     T C C C C     A
    C T G A        G      | | | | |     A
  C         T G T G       A G G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        C     GGAC
                    T - A
                    T + G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G *
                    T T C
intron: position=38, length=30 (in A-loop)
GCTCACGGAGTCACCCTCCGCGAGGAAGAC
Intron
Comment/Decision
Genome/Seq. Info.-

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