The detailed information of tRNA gene sequence


Sequence ID>C231004621
Genome IDAP024487
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera javensis (ex Sakai et al. 2022) [AP024487]
Start position on genome 2202991
End posion on genome 2203081
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
taaagtatgt
tRNA gene sequence 
GGGCCGGTAGCTCAGCCTGGAAGAGCGCTCGGCTTGCAACCGAGAGGTCCCCGGGTTCAA
ATCCCGGCCGGTCCACat
Downstream region at tRNA end position 
ccttgttgca
Secondary structure (Cloverleaf model)
>C231004621	Ala	TGC
                   t      ACat ccttgttgca
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G A A        G     AGGTCC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A *
                    T G C
intron: position=38, length=15 (in A-loop)
ACCCATGGGCAGGAT
Intron
Comment/Decision
Genome/Seq. Info.-

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