The detailed information of tRNA gene sequence


Sequence ID>SRA1011776
Genome IDSRR020493.74811
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 179
End posion on genome 266
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttttttgcca
tRNA gene sequence 
GGAGGGGTGGTCGAGTGGTTTAAGGCTCTAGTCTTGAAAACTAGCGTGTCTGCAAGGGCA
CCGTGGGTTCGAATCCCACCCCCTCCGCtc
Downstream region at tRNA end position 
ttataaaaag
Secondary structure (Cloverleaf model)
>SRA1011776	Ser	TGA
                   a      GCtc ttataaaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C T G       G T G G G     C
    G         | + |                 T T
    T       A G G C
      T T A        T     CGTGTCTGCAAGGGCACC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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