The detailed information of tRNA gene sequence


Sequence ID>SRA1011852
Genome IDSRR020493.97650
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 107
End posion on genome 183
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaataataa
tRNA gene sequence 
GGGCGAGTAGCTCAGTTGGTTAGAGCAGAGCGCTCATAACGCTTTGGTCGCAGGTTCGAG
TCCTGCCTCGCCTACCA
Downstream region at tRNA end position 
taatatcaat
Secondary structure (Cloverleaf model)
>SRA1011852	Met	CAT
                   a      ACCA taatatcaat
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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