The detailed information of tRNA gene sequence


Sequence ID>SRA1011974
Genome IDSRR020493.140398
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 61
End posion on genome 149
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgctatcacC
tRNA gene sequence 
TGAGGGGTGGTCGAGTGGTTTAAGGCTCTAGTCTTGAAAACTAGCGTATCTGCAAGGGTA
CCGTGGGTTCGAATCCCACCCCCTCCGTtt
Downstream region at tRNA end position 
aaataaaaag
Secondary structure (Cloverleaf model)
>SRA1011974	Ser	TGA
                   C      GTtt aaataaaaag
                     T   C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C T G       G T G G G     C
    G         | + |                 T T
    T       A G G C
      T T A        T     CGTATCTGCAAGGGTACC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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