The detailed information of tRNA gene sequence


Sequence ID>SRA1012090
Genome IDSRR020493.178114
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 56
End posion on genome 129
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aatttcccac
tRNA gene sequence 
ACGGGTATGGTGCAATGGTAGCATTCCGGTCTCCAAAACCGTCGATGGGAGTTCGAATCT
CTCTACCCGTGCAA
Downstream region at tRNA end position 
aaaaatagtg
Secondary structure (Cloverleaf model)
>SRA1012090	Trp	CCA
                   c      GCAA aaaaatagtg
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C T C T C     A
        A A        G      | + | | |     G
      T     C G T G       G G G A G     C
      G     | | | +                 T T
      G     G C A T
        T A        T     CGAT
                    C   T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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