The detailed information of tRNA gene sequence


Sequence ID>SRA1012191
Genome IDSRR020493.209940
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 24
End posion on genome 108
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttcctaaagg
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGAACGACTCGAAATCGTTTAATAGGCAACTATTC
GTGGGTTCGAATCCCACCCTCTCCGgat
Downstream region at tRNA end position 
tatttttagt
Secondary structure (Cloverleaf model)
>SRA1012191	Ser	CGA
                   g      Ggat tatttttagt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TAATAGGCAACTATTC
                    A - T
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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