The detailed information of tRNA gene sequence


Sequence ID>SRA1012229
Genome IDSRR020493.222447
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 255
End posion on genome 179
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ccaacctcat
tRNA gene sequence 
TCCTCCTTAGCTCAGCTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCCTTGGTTCGAG
CCCAAGAGGGGGAGCCT
Downstream region at tRNA end position 
tataggtcaa
Secondary structure (Cloverleaf model)
>SRA1012229	Asn	GTT
                   t      GCCT tataggtcaa
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     C - G
                     T - A          C G
                    T     G A A C C     A
      C G A        A      | | | | |     G
    T       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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