The detailed information of tRNA gene sequence


Sequence ID>SRA1012284
Genome IDSRR020493.244711
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 42
End posion on genome 117
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
caagctggat
tRNA gene sequence 
AGGGGTATAGCTCAGCTGGTAGAGCGACGGTCTCCAAAACCGTAGGTCGCGGGTTCGAAC
CCTGCTGCCCCTGCCA
Downstream region at tRNA end position 
aaaaaatcaa
Secondary structure (Cloverleaf model)
>SRA1012284	Trp	CCA
                   t      GCCA aaaaaatcaa
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          C A
                    T     C G T C C     A
      C G A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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