The detailed information of tRNA gene sequence


Sequence ID>SRA1012300
Genome IDSRR020493.252345
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 123
End posion on genome 48
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cccgagcaga
tRNA gene sequence 
GGCCCCGTCGTCTAGAGGCCTAGGACGCCGCCCTCTCAAGGCGGAAACGCCGGTTCAAAT
CCGGTCGGGGCTGCTA
Downstream region at tRNA end position 
aaactctaaa
Secondary structure (Cloverleaf model)
>SRA1012300	Glu	CTC
                   a      GCTA aaactctaaa
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G G C C     A
      A G A        C      + | | | |     A
    G       T C T G       G C C G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        G     AAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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