The detailed information of tRNA gene sequence


Sequence ID>SRA1012414
Genome IDSRR020493.302151
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 177
End posion on genome 102
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
ctttctctgt
tRNA gene sequence 
GCGGGTGTGGTGTTAACGGCTAGCACAATAGCCTTCCAAGCTATTGGTACGGGTTCGAAT
CCCGTCACCCGCTCCA
Downstream region at tRNA end position 
ttaaaaacaa
Secondary structure (Cloverleaf model)
>SRA1012414	Gly	TCC
                   t      TCCA ttaaaaacaa
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G C C C     A
      A A T        G      | | | | |     G
    C       T G T G       A C G G G     C
    G       + | | |                 T T
    G       G C A C
      C T A        A     TGGT
                    A - T
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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