The detailed information of tRNA gene sequence


Sequence ID>SRA1012549
Genome IDSRR020493.349353
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 49
End posion on genome 124
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aatcagatcT
tRNA gene sequence 
GGGACCGTAGTTCAACCGGTTAGAGCACCGCCCTGTCACGGCGGAAGTTGCGGGTTCGAA
TCCCGTCGGTCCCGTtt
Downstream region at tRNA end position 
tcaccaccaa
Secondary structure (Cloverleaf model)
>SRA1012549	Asp	GTC
                   T      GTtt tcaccaccaa
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     T G C C C     A
      C A A        A      + | | | |     G
    C       C T T G       G C G G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        A     AAGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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