The detailed information of tRNA gene sequence


Sequence ID>SRA1012827
Genome IDSRR020493.443817
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 291
End posion on genome 215
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tggcctacaa
tRNA gene sequence 
GGCGAGGTAGCTCAGCTGGTTAGAGCGTCGGATTCATAACCCGGAGGCCGGGGGTTCAAG
TCCCCCCTTCGCTACAA
Downstream region at tRNA end position 
aagaaattat
Secondary structure (Cloverleaf model)
>SRA1012827	Met	CAT
                   a      ACAA aagaaattat
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G + T
                     G - C          T G
                    T     C C C C C     A
      C G A        A      | | | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    T + G
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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