The detailed information of tRNA gene sequence


Sequence ID>SRA1012973
Genome IDSRR020494.30283
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 123
End posion on genome 47
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaccaactga
tRNA gene sequence 
CGCGGGGTGGAGCAGTCCGGTAGCTCGTTGGGCTCATAACCCGAAGGTCGCAGGTTCGAA
TCCTGCCCCCGCAACCA
Downstream region at tRNA end position 
aataaactgg
Secondary structure (Cloverleaf model)
>SRA1012973	Met	CAT
                   a      ACCA aataaactgg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     G
    C       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T + G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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