The detailed information of tRNA gene sequence


Sequence ID>SRA1013020
Genome IDSRR020494.76108
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 15
End posion on genome 102
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgcatgcatt
tRNA gene sequence 
GGAGAAATGGCAGAGTGGTCGAATGCGGCGGTCTTGAAAACCGTTGAGGGTCAAACCTCC
GGGGGTTCGAATCCCTCTTTCTCCGCAA
Downstream region at tRNA end position 
ctgagtttag
Secondary structure (Cloverleaf model)
>SRA1013020	Ser	TGA
                   t      GCAA ctgagtttag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGAGGGTCAAACCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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