The detailed information of tRNA gene sequence


Sequence ID>SRA1013030
Genome IDSRR020494.83486
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 8
End posion on genome 82
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
nnngcagcac
tRNA gene sequence 
GGACACGTGGCCCAGCTGGATAAGGCGGCGGCCTCCTAAGCCGCAGATCGCGGGTTCGAA
TCCTGCCGTGTCCGCtt
Downstream region at tRNA end position 
ttctaaacac
Secondary structure (Cloverleaf model)
>SRA1013030	Arg	CCT
                   c      GCtt ttctaaacac
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     C - G
                     G - C          T A
                    T     C G T C C     A
      C G A        G      | | + | |     G
    T       C C C G       G C G G G     C
    G         | | |                 T T
    G       A G G C
      A T A        G     AGATC
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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