The detailed information of tRNA gene sequence


Sequence ID>SRA1013091
Genome IDSRR020514.9911
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 7
End posion on genome 89
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
nnnngtggaa
tRNA gene sequence 
GGCAGTGTGTCCGAGTGGTTAAGGAGTCGGACTCGAAATCCGATGGGCTCTGCCCGCGGG
GGTTCGAATCCCCTCGCTGTCGCtc
Downstream region at tRNA end position 
ttttatgttt
Secondary structure (Cloverleaf model)
>SRA1013091	Ser	CGA
                   a      GCtc ttttatgttt
                     G - C
                     G + T
                     C - G
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     T C C C C     A
      T G A        G      + | | | |     G
    G       G C C T       G G G G G     C
    G         | | |                 T T
    T       A G G A
      T A          G     TGGGCTCTGCCCGC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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