The detailed information of tRNA gene sequence


Sequence ID>SRA1013106
Genome IDSRR020514.20287
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 73
End posion on genome 1
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnattcaaag
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGGGTTGCGGGTTCGATC
CCTGCCACTCCTGnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1013106	Trp	CCA
                   g      Gnnn nnnnnnnnnn
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          C T
                    T     C G T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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