The detailed information of tRNA gene sequence


Sequence ID>SRA1013125
Genome IDSRR020514.30869
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 255
End posion on genome 181
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position
nngatttatt
tRNA gene sequence
GGCCCGTTCGTCTAGTGGTTAGGACTCCAGGTTTTCATCCTGGCAACAGGAGTTCGATTC
TCCTACGGGCTACAA
Downstream region at tRNA end position
gtaaggctcg
Secondary structure (Cloverleaf model)
>SRA1013125	Glu	TTC
                   t      ACAA gtaaggctcg
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     T C C T C     A
      T G A        C      | | | | |     G
    G       T C T G       A G G A G     C
    G       + | | |                 T T
    T       G G A C
      T A          T     CAAC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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