The detailed information of tRNA gene sequence


Sequence ID>SRA1013130
Genome IDSRR020514.33995
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 90
End posion on genome 181
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atatttacat
tRNA gene sequence 
GGAGAGGTGCTAGAGTGGCCGAATAGGCGCGACTGGAAATCGCGTGTTTCTTGCAAGAGA
AACCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tcaacaaact
Secondary structure (Cloverleaf model)
>SRA1013130	Ser	GGA
                   t      GCCA tcaacaaact
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A T C       G T G G G     C
    G         | | |                 T T
    C       A T A G
      C G A        G     TGTTTCTTGCAAGAGAAACC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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