The detailed information of tRNA gene sequence


Sequence ID>SRA1013142
Genome IDSRR020514.41867
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 208
End posion on genome 133
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnnnnntctt
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGTAGAGCGCCGGTCTCCAAAACCGGAGGTTGGGGGTTCGAGT
CCCTCCGCTCCTGCCA
Downstream region at tRNA end position 
aaatgagagt
Secondary structure (Cloverleaf model)
>SRA1013142	Trp	CCA
                   t      GCCA aaatgagagt
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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