The detailed information of tRNA gene sequence


Sequence ID>SRA1013147
Genome IDSRR020514.44324
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 208
End posion on genome 124
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caacaaacat
tRNA gene sequence 
GCGGGGATCGCCTAGCCTGGTAGGGCGTGGGATTGCTAATTCCATGTTCGCAAGAACACG
GGGGTTCAAATCCCTCTCCCCGCGCtt
Downstream region at tRNA end position 
tttcaattaa
Secondary structure (Cloverleaf model)
>SRA1013147	Ser	GCT
                   t      GCtt tttcaattaa
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        C      | + | | |     A
    C       T C C G       G G G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGTTCGCAAGAACAC
                    T - A
                    G - C
                    G - C
                    G + T
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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