The detailed information of tRNA gene sequence


Sequence ID>SRA1013150
Genome IDSRR020514.48056
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 129
End posion on genome 219
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttcaagataa
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGCTGAAAGCGCTCCCCTGCTAAGGGAGTATACGTTTATAGCGT
ATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gtggcattaa
Secondary structure (Cloverleaf model)
>SRA1013150	Ser	GCT
                   a      GCCA gtggcattaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    C       A A G C
      T G A        G     TATACGTTTATAGCGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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