The detailed information of tRNA gene sequence


Sequence ID>SRA1013173
Genome IDSRR020514.56103
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 11
End posion on genome 103
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttaaatcatt
tRNA gene sequence 
GGAGGCGTGGGAGAGTTGGTTTAATCCAGCAGTTTGCTAAATTGCCGTACGGTTAATTCC
GTACCGTTGGTTCGAATCCAACCGCCTCCGCCA
Downstream region at tRNA end position 
tagattatct
Secondary structure (Cloverleaf model)
>SRA1013173	Ser	GCT
                   t      GCCA tagattatct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C A A C C     A
    T T G A        G      | | | | |     G
  G         G A G G       G T T G G     C
  G           | | |                 T T
  T         A T C C
    T T A          A     CGTACGGTTAATTCCGTACC
                    G - C
                    C - G
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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