The detailed information of tRNA gene sequence


Sequence ID>SRA1013179
Genome IDSRR020514.58746
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 246
End posion on genome 157
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cattcgcttt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCTAAGGCGGTAGACTCGAAATCTATTGTGCGTTCACGCGTA
CCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
catatgagta
Secondary structure (Cloverleaf model)
>SRA1013179	Ser	CGA
                   t      GCCA catatgagta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TGTGCGTTCACGCGTACC
                    G + T
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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