The detailed information of tRNA gene sequence


Sequence ID>SRA1013179
Genome IDSRR020514.58746
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 246
End posion on genome 157
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position
cattcgcttt
tRNA gene sequence
GGAGAGGTGGCCGAGTGGTCTAAGGCGGTAGACTCGAAATCTATTGTGCGTTCACGCGTA
CCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position
catatgagta
Secondary structure (Cloverleaf model)
>SRA1013179	Ser	CGA
                   t      GCCA catatgagta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TGTGCGTTCACGCGTACC
                    G + T
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK