The detailed information of tRNA gene sequence


Sequence ID>SRA1013199
Genome IDSRR020514.67412
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 244
End posion on genome 149
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atttgaattt
tRNA gene sequence 
GGGAATGATTGAGTGGCTGGTGCTCTCCACGGCCTTCAAAGCCGTTGTCCCCGGCAGTCC
CGGGGAGCTGGGTTCGATTCCCAGGCGTTCCCGCCA
Downstream region at tRNA end position 
tttgtaaagt
Secondary structure (Cloverleaf model)
>SRA1013199	SeC	TCA
                   t      GCCA tttgtaaagt
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T + G
                     G - C
                     A   G          T T
                    T     G A C C C     A
      C G G        T      | | | | |     G
    T       T G A G       C T G G G     C
    G         | | |                 T T
    G       T C T C
      T G C        C     TGTCCCCGGCAGTCCCGGGGAG
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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