The detailed information of tRNA gene sequence


Sequence ID>SRA1013200
Genome IDSRR020514.68755
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 116
End posion on genome 205
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tctcggcgac
tRNA gene sequence 
GGAAGGTTGCCAGAGCGGACGAATGGGGCGGCCTCGAAAGCCGTTGTGGCCTCCGGGTCA
CCGTGGGTTCGAATCCCACACCTTCCGCCA
Downstream region at tRNA end position 
tcccggtgac
Secondary structure (Cloverleaf model)
>SRA1013200	Ser	CGA
                   c      GCCA tcccggtgac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G         | | |                 T T
    A       A T G G
      C G A        G     TGTGGCCTCCGGGTCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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