The detailed information of tRNA gene sequence


Sequence ID>SRA1013211
Genome IDSRR020514.72070
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 117
End posion on genome 26
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaggagaaa
tRNA gene sequence 
GGAGAGATGGGTGAGTGGCTTAAACCACAGGTTTGCTAAACCTGCGAAGGATTTAATTTC
TTCCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tgatttataa
Secondary structure (Cloverleaf model)
>SRA1013211	Ser	GCT
                   a      GCCA tgatttataa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T T A        A     CGAAGGATTTAATTTCTTCC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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