The detailed information of tRNA gene sequence


Sequence ID>SRA1013213
Genome IDSRR020514.72691
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 240
End posion on genome 164
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnncaataat
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCAGTGGACTCATAATCCATTGGTCGGAGGTTCGAG
TCCTCCCGGGCCCACCA
Downstream region at tRNA end position 
agaaaaagtt
Secondary structure (Cloverleaf model)
>SRA1013213	Met	CAT
                   t      ACCA agaaaaagtt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C C T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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