The detailed information of tRNA gene sequence


Sequence ID>SRA1013215
Genome IDSRR020514.74303
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 159
End posion on genome 73
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tttattggtt
tRNA gene sequence 
GCCGGTGTGGCGGAATTGGCAGACGCGACGGATTCAAAATCCGTTTCCCGTAAGGGAGTG
GGGGTTCGAGCCCCTCCACCGGTACCA
Downstream region at tRNA end position 
ttggaaagga
Secondary structure (Cloverleaf model)
>SRA1013215	Leu	CAA
                   t      ACCA ttggaaagga
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          C G
                    T     C T C C C     A
      T A A        G      | + | | |     G
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TTCCCGTAAGGGAGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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