The detailed information of tRNA gene sequence


Sequence ID>SRA1013216
Genome IDSRR020514.74454
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 138
End posion on genome 219
Amino Acid Ser
Anticodon AGA
Upstream region at tRNA start position 
ataaacgtga
tRNA gene sequence 
GACACTGTGTCCGAGTGGTTAAGGAGATGGACTAGAAATCCATTGGGCTCTGCCCGCAGG
GGTTCGAATCCCCTTGGTGTCGtta
Downstream region at tRNA end position 
ttaatcgatt
Secondary structure (Cloverleaf model)
>SRA1013216	Ser	AGA
                   a      Gtta ttaatcgatt
                     G - C
                     A - T
                     C - G
                     A - T
                     C - G
                     T + G
                     G + T          T A
                    T     T C C C C     A
      T G A        G      | | | | |     G
    G       G C C T       A G G G G     C
    G         | | |                 T T
    T       A G G A
      T A          G     TGGGCTCTGCCCGC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    A G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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