The detailed information of tRNA gene sequence


Sequence ID>SRA1013221
Genome IDSRR020514.76209
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 248
End posion on genome 175
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtgcaggtga
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGTTAGAGTGCCGGTCTGTCACACCGGAGGCCGCGGGTTCGAG
TCCCGTCAGCCCCGtgg
Downstream region at tRNA end position 
cgctgtttga
Secondary structure (Cloverleaf model)
>SRA1013221	Asp	GTC
                   a      Gtgg cgctgtttga
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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