The detailed information of tRNA gene sequence


Sequence ID>SRA1013228
Genome IDSRR020514.78971
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 104
End posion on genome 179
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
acggttttat
tRNA gene sequence 
GCTCCTGTAGTGTAGTCCGGTCAAGCATTTAGGCCTTTCACGCCTGAGACTCGGGTTCGA
ATCCCGACGGGAGCACtc
Downstream region at tRNA end position 
aagtttaata
Secondary structure (Cloverleaf model)
>SRA1013228	Glu	TTC
                   t      ACtc aagtttaata
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     A G C C C     A
    C T G A        A      | | | | |     G
  C         T G T G       T C G G G     C
  G         + | | +                 T T
  G         G C A T
    T C A A        T     AGAC
                    T + G
                    A - T
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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