The detailed information of tRNA gene sequence


Sequence ID>SRA1013233
Genome IDSRR020514.82049
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 178
End posion on genome 91
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
taaatctttt
tRNA gene sequence 
GCCGAGGTGGCGGAATTGGTAGACGCGCCAGCTTCAGGTGCTGGTGGGGGGCAACCTCGT
GTCGGTTCGAGTCCGACCCTCGGTACCA
Downstream region at tRNA end position 
tttctgtgca
Secondary structure (Cloverleaf model)
>SRA1013233	Leu	CAG
                   t      ACCA tttctgtgca
                     G + T
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T G
                    T     C A G C C     A
      T A A        G      | | | | |     G
    T       G G C G       G T C G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGGGGGCAACCTCGT
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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