The detailed information of tRNA gene sequence


Sequence ID>SRA1013236
Genome IDSRR020514.82676
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 83
End posion on genome 6
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gcctgctcaa
tRNA gene sequence 
GGGCGCGTAGCTTAGTTTGGCTGGAGCACCCGGCTGATAACCGGGAGGTCACAGGTTCAA
ATCCTGTCGTGCCCACCA
Downstream region at tRNA end position 
aatcgnnnnn
Secondary structure (Cloverleaf model)
>SRA1013236	Ile	GAT
                   a      ACCA aatcgnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     C - G
                     G - C          T A
                    T     T G T C C     A
    T T G A        A      | | | | |     A
  T         T T C G       A C A G G     C
  G         + | | |                 T T
  G         G A G C
    C T G          A     AGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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