The detailed information of tRNA gene sequence


Sequence ID>SRA1013247
Genome IDSRR020514.87656
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 1
End posion on genome 79
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGACCCGTAGCTCAGTTGGTTAGAGGCGCTCGGCTCATAACCGAGGTGGTCATCGGTTCA
AATCCGGTCGGGTCCACCA
Downstream region at tRNA end position 
ctcagaaggc
Secondary structure (Cloverleaf model)
>SRA1013247	Met	CAT
                   n      ACCA ctcagaaggc
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G G C C     A
    T T G A        A      | + | | |     A
  G         C T C G       A T C G G     C
  G           + | |                 T T
  T         A G G C
    T A G          G     GTGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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