The detailed information of tRNA gene sequence


Sequence ID>SRA1013248
Genome IDSRR020514.88088
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 3
End posion on genome 79
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position
nnnnnnnnag
tRNA gene sequence
GGGCCGGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGAAGTTCGAA
TCTTCCTCGGCCCACCA
Downstream region at tRNA end position
taacttaact
Secondary structure (Cloverleaf model)
>SRA1013248	Ile	GAT
                   g      ACCA taacttaact
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T          T A
                    T     C C T T C     A
      T G A        A      | | | | |     G
    T       C T C G       G G A A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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