The detailed information of tRNA gene sequence


Sequence ID>SRA1013250
Genome IDSRR020514.89051
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 143
End posion on genome 67
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgttcaatgg
tRNA gene sequence 
GGCGGAGTAGCTCAGTTGGTTAGAGCAGCGGAATCATAATCCGCGTGTCGGGGGTTCGAG
TCCCTCCTCCGCTACCA
Downstream region at tRNA end position 
attattccat
Secondary structure (Cloverleaf model)
>SRA1013250	Met	CAT
                   g      ACCA attattccat
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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