The detailed information of tRNA gene sequence


Sequence ID>SRA1013261
Genome IDSRR020514.100855
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 106
End posion on genome 181
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttcccctaT
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCGGGTTCGAA
TCCCGCCCCCGCTATga
Downstream region at tRNA end position 
gcttttgaag
Secondary structure (Cloverleaf model)
>SRA1013261	Met	CAT
                   T      ATga gcttttgaag
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    C       C G A G       G C G G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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