The detailed information of tRNA gene sequence


Sequence ID>SRA1013264
Genome IDSRR020514.104538
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 9
End posion on genome 98
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnctatatct
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCACGCTTGGAAAGCGTGTAAACGTTCACGCGTT
TCGAGGGTTCGAATCCCTCTCTCTCCGCAA
Downstream region at tRNA end position 
catggccatt
Secondary structure (Cloverleaf model)
>SRA1013264	Ser	GGA
                   t      GCAA catggccatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TAAACGTTCACGCGTTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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