The detailed information of tRNA gene sequence


Sequence ID>SRA1013268
Genome IDSRR020514.106531
Search identical group
Phylum/ClassPlanktonic microbial communities from Sargasso Sea, BATS Station (SRP001048)
Species
Start position on genome 110
End posion on genome 33
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcggcctcgt
tRNA gene sequence 
AGCGGGTTGGAGTAGTCAGGTTATCTCGTCGGGCTCATAACCCGGAGACCGGTGGTTCAA
ATCCACCATCCGCTACCA
Downstream region at tRNA end position 
agaatttgaa
Secondary structure (Cloverleaf model)
>SRA1013268	Met	CAT
                   t      ACCA agaatttgaa
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     T - A          T A
                    T     C C A C C     A
    C T G A        G      | | | | |     A
  A         T G A G       G G T G G     C
  G           | | |                 T T
  G         T C T C
    T T A          G     AGACC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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